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Medals | | Club | I | II | III | Competitors |
|---|
| 1. | Tallinna Spordiakadeemia | 7 | 10 | 9 | 47 |
| 2. | Olümpiko | 7 | 4 | 5 | 33 |
| 3. | Aitado | 3 | 3 | 2 | 12 |
| 4. | Kohtla-Järve Kalev | 2 | 1 | 1 | 4 |
| 5. | Ookami | 1 | 2 | 2 | 19 |
| 6. | Spordiklubi Barra | 1 | 1 | 5 | 15 |
| 7. | Kibuvits judo | 1 | 0 | 1 | 3 |
| 7. | Toni judokool EST MTÜ | 1 | 0 | 1 | 5 |
| 7. | Võru Judoklubi REI | 1 | 0 | 1 | 3 |
| 10. | Tartu DO | 1 | 0 | 0 | 1 |
| 11. | Judoklubi Samurai | 0 | 1 | 3 | 19 |
| 12. | Energia/Buffen-do | 0 | 1 | 2 | 11 |
| 13. | Tartu Valla Spordiklubi | 0 | 1 | 1 | 3 |
| 14. | Budolinn | 0 | 1 | 0 | 5 |
| 15. | Judoklubi Dokyo | 0 | 0 | 5 | 9 |
| 16. | M-Dojo | 0 | 0 | 1 | 3 |
| 16. | SK Dvigatel | 0 | 0 | 1 | 1 |
| 16. | Sk Zen | 0 | 0 | 1 | 2 |
| 16. | Spordiklubi Altia | 0 | 0 | 1 | 5 |
| 20. | Audentese Spordiklubi | 0 | 0 | 0 | 1 |
| 20. | Rapla Judoklubi | 0 | 0 | 0 | 2 |
| 20. | SK Byakko | 0 | 0 | 0 | 4 |
| 20. | sk Dodze | 0 | 0 | 0 | 1 |
| 20. | SK Taifu / Viljandi SK | 0 | 0 | 0 | 3 |
| 20. | SPORDIKLUBI SAKURA | 0 | 0 | 0 | 1 |
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