Medals |
| Club | I | II | III | Competitors |
| 1. | EST/Tallinna Spordiakadeemia | 10 | 6 | 3 | 27 |
| 2. | EST/Spordiklubi Barra | 4 | 6 | 10 | 26 |
| 3. | LAT/JUDO CLUB SENSEI | 4 | 1 | 4 | 13 |
| 4. | EST/Budolinn | 3 | 2 | 1 | 15 |
| 4. | EST/Judoklubi Dokyo | 3 | 2 | 1 | 13 |
| 6. | EST/Olümpiko | 3 | 0 | 5 | 16 |
| 7. | EST/M-Dojo | 3 | 0 | 2 | 9 |
| 8. | LAT/TIGER Judo Club | 3 | 0 | 0 | 7 |
| 9. | EST/Kibuvits judo | 2 | 5 | 6 | 18 |
| 10. | FIN/Vantaan Jukara | 2 | 2 | 4 | 12 |
| 11. | FIN/Meido-Kan ry | 2 | 2 | 3 | 11 |
| 12. | FIN/Kippon ry | 2 | 2 | 2 | 8 |
| 13. | EST/Kohtla-Järve Kalev | 2 | 0 | 1 | 3 |
| 14. | LAT/Judo club KIN | 1 | 3 | 2 | 10 |
| 15. | EST/Ookami | 1 | 2 | 5 | 37 |
| 16. | EST/Energia/Buffen-do | 1 | 2 | 3 | 8 |
| 17. | EST/Võru Judoklubi REI | 1 | 1 | 2 | 9 |
| 18. | FIN/Tampereen Judo | 1 | 1 | 1 | 6 |
| 19. | EST/Toni judokool EST MTÜ | 1 | 0 | 1 | 6 |
| 20. | EST/Judoklubi Samurai | 1 | 0 | 0 | 5 |
| 20. | FIN/Kirkkonummen judoseura | 1 | 0 | 0 | 1 |
| 20. | LAT/JUDOKAN | 1 | 0 | 0 | 2 |
| 20. | LAT/V.Zelonija sporta skola | 1 | 0 | 0 | 3 |
| 24. | LAT/Judo Club Kaidzen | 0 | 2 | 3 | 10 |
| 25. | EST/Mikado | 0 | 2 | 0 | 5 |
| 26. | EST/Aitado | 0 | 1 | 1 | 5 |
| 27. | EST/Audentese Spordiklubi | 0 | 1 | 0 | 2 |
| 27. | EST/SK Taifu / Viljandi SK | 0 | 1 | 0 | 3 |
| 27. | FIN/Hontai Judo | 0 | 1 | 0 | 1 |
| 27. | FIN/Ping-Viinit | 0 | 1 | 0 | 1 |
| 27. | LAT/Adazu BJSS | 0 | 1 | 0 | 1 |
| 27. | LAT/Vidzemes DS | 0 | 1 | 0 | 1 |
| 33. | EST/Tartu Valla Spordiklubi | 0 | 0 | 0 | 1 |
| 33. | FIN/Keidokan | 0 | 0 | 0 | 1 |
| 33. | FIN/Kippon RY | 0 | 0 | 0 | 1 |
| 33. | FIN/Kita-Kan Kemi | 0 | 0 | 0 | 1 |
| 33. | LAT/Džudo klub Samurs | 0 | 0 | 0 | 1 |